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Contact us

Source code and issue tracker​

You can find source code at our github repo: https://github.com/twlab/eg3

If you find any issue or have any question, please submit an issue here: https://github.com/twlab/eg3/issues. Thank you.

note

Using github issues is our preferred way to commmunicate with users :)

Get help on social media​

You can also get help from social media:

  1. Discord server
  2. Google group
  3. Facebook page
  4. X
  5. Youtube Channel

Publish with the browser​

First thank you for considering publishing figures, datahubs and session links using the Browser. For best result, please put all your track files on a permenant web location (like your own web server or Amazon S3), then use hub or sessionFile URL parameter for browser hub URL. Browser URL with hub or sessionFile is permenant as long as your track files from your web server stay.

important

using session bundle id is not recommended as session id is suppose to be shared with trusted people, share the session Id in a public environment may result unwanted edits to your session.

Cite the browser​

If you used the browser in your research, please help us by citing the following paper(s):

(the original browser paper)

Daofeng Li, Silas Hsu, Deepak Purushotham, Renee L Sears, Ting Wang, WashU Epigenome Browser update, Nucleic Acids Research, Volume 47, Issue W1, 02 July 2019, Pages W158--W165, https://doi.org/10.1093/nar/gkz348 [PMID: 31165883].

(2022 update)

Daofeng Li, Deepak Purushotham, Jessica K Harrison, Silas Hsu, Xiaoyu Zhuo, Changxu Fan, Shane Liu, Vincent Xu, Samuel Chen, Jason Xu, Shinyi Ouyang, Angela S Wu, Ting Wang, WashU Epigenome Browser update 2022, Nucleic Acids Research, Volume 50, Issue W1, 5 July 2022, Pages W774--W781, https://doi.org/10.1093/nar/gkac238 [PMID: 35412637].

(3D browser)

Daofeng Li, Jessica K. Harrison, Deepak Purushotham & Ting Wang, Exploring genomic data coupled with 3D chromatin structures using the WashU Epigenome Browser, Nature Methods volume 19, pages 909--910 (2022) [PMID: 35864166].

(Comparative browser paper)

Zhuo, Xiaoyu, Silas Hsu, Deepak Purushotham, Prashant K. Kuntala, Jessica K. Harrison, Alan Y. Du, Samuel Chen, Daofeng Li, and Ting Wang. Comparing Genomic and Epigenomic Features across Species Using the WashU Comparative Epigenome Browser, Genome Research, May 8, 2023, gr.277550.122. https://doi.org/10.1101/gr.277550.122.